build(agent): molt-z#db0ec5 iteration
This commit is contained in:
parent
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node_modules/
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.npmrc
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.env
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.env.*
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__tests__/
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coverage/
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.nyc_output/
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dist/
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build/
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.cache/
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*.log
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.DS_Store
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tmp/
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.tmp/
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__pycache__/
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*.pyc
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.venv/
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venv/
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*.egg-info/
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.pytest_cache/
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READY_TO_PUBLISH
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Architecture
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- Core: mltrail_verifiable_provenance_ledger_for
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- Ledger: ledger.py provides an append-only hash-chain ledger with a genesis block. add_record appends blocks with a single contract payload for simplicity.
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- Contracts: mltrail_verifiable_provenance_ledger_for/contracts.py defines data contracts (Experiment, Run, Dataset, Model, Environment, EvaluationMetric, Policy).
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- Registry: mltrail_verifiable_provenance_ledger_for/registry.py offers a minimal contract registry with versioning and schemas.
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- Adapters: mltrail_verifiable_provenance_ledger_for/adapters.py provides starter adapters (MLFlow-like, WandB-like).
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- Governance: mltrail_verifiable_provenance_ledger_for/governance.py includes a minimal DID-like identity and governance log entry model.
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- Helpers: mltrail_verifiable_provenance_ledger_for/util.py offers environment hashing.
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Tech Stack
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- Language: Python 3.9+
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- Core libs: json, time, hashlib, hmac (stdlib)
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- Testing: pytest (tests/ directory)
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Testing Commands
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- Run tests: pytest -q
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- Build package: python3 -m build
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- Delta-sync sanity: run small scripts that exercise delta_sync in mltrail_verifiable_provenance_ledger_for/ledger.py
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Rules
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- Do not modify external directories unless required by features.
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- Add tests for new features and ensure all tests pass before closing tasks.
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- Keep changes minimal and well-scoped.
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25
README.md
25
README.md
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# mltrail-verifiable-provenance-ledger-for
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# MLTrail: Verifiable Provenance Ledger for Federated ML Experiments (MVP)
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A lightweight, open-source ledger platform for recording machine-learning experiments across organizations and teams, enabling verifiable reproducibility, provenance, and auditability in federated and multi-party collaborations. MLTrail stores compac
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This repository contains a minimal, working MVP of MLTrail, a light-weight,
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open-source ledger platform for recording machine-learning experiments across
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organizations. It demonstrates core ideas from the original concept: an append-only
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hash-chained ledger, compact contract records (Experiment, Run, Dataset, Model,
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Environment, EvaluationMetric, Policy), delta-sync primitives, and lightweight adapters.
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What you get in this MVP:
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- Core ledger with cryptographic hash chaining (no external dependencies required)
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- Data contracts (Experiment, Run, Dataset, Model, Environment, EvaluationMetric, Policy)
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- Reproducibility helpers (environment fingerprint) and a small governance hook
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- Two starter adapters (MLFlow-like and WandB-like) to publish records
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- A minimal contract registry for schemas and conformance tests scaffold
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- Basic delta-sync primitive to simulate cross-partition reconciliation
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- CLI/test scaffold for local verification
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How to run the MVP locally (quickstart):
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- Install Python 3.9+ and run tests with pytest
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- See test files under tests/ for guidance
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This is a foundational MVP intended for stepping stones into a broader ecosystem and governance model. Extend it to implement more sophisticated delta-sync, secure anchoring, and adapter ecosystems as needed.
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Hook the package into a Python packaging workflow via pyproject.toml (provided).
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"""MLTrail Verifiable Provenance Ledger (MVP) Package
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This package provides a minimal, working MVP of a verifiable provenance ledger
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for federated ML experiments. It includes:
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- Core contract dataclasses (Experiment, Run, Dataset, Model, Environment, EvaluationMetric, Policy)
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- Append-only hash-chain ledger with delta-sync primitives
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- Reproducibility toolkit helpers (environment fingerprinting)
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- Simple governance/log hooks
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- Lightweight adapters scaffolding (MLFlow-like and WandB-like)
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The goal is to be a pragmatic, minimal, testable foundation that can be extended
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into a fuller ecosystem.
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"""
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from .ledger import Ledger, Block, ContractRecord
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from .contracts import (
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Experiment, Run, Dataset, Model, Environment, EvaluationMetric, Policy
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)
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from .adapters import MLFlowAdapter, WandBAdapter, Adapter
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from .registry import ContractRegistry
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from .util import environment_hash
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from .governance import DID, GovernanceLogEntry
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__all__ = [
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"Ledger",
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"Block",
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"ContractRecord",
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"Experiment",
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"Run",
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"Dataset",
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"Model",
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"Environment",
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"EvaluationMetric",
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"Policy",
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"MLFlowAdapter",
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"WandBAdapter",
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"Adapter",
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"ContractRegistry",
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"environment_hash",
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"DID",
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"GovernanceLogEntry",
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]
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from __future__ import annotations
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from typing import Dict, Any, Optional
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from .ledger import Ledger
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class Adapter:
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def __init__(self, ledger: Ledger):
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self.ledger = ledger
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def publish(self, payload: Dict[str, Any]) -> None:
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raise NotImplementedError
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class MLFlowAdapter(Adapter):
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"""A tiny MLFlow-like adapter that publishes experiments to the ledger."""
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def publish(self, payload: Dict[str, Any]) -> None:
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# expect payload to contain contract_type and payload
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contract_type = payload.get("type", "Experiment")
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data = payload.get("payload", {})
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self.ledger.add_record(contract_type, data)
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class WandBAdapter(Adapter):
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"""A tiny WandB-like adapter for provenance publishing."""
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def publish(self, payload: Dict[str, Any]) -> None:
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contract_type = payload.get("type", "Experiment")
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data = payload.get("payload", {})
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self.ledger.add_record(contract_type, data)
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from dataclasses import dataclass, asdict
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from typing import Any, Dict, Optional
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@dataclass
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class Experiment:
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id: str
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name: str
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version: int
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description: str
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metadata: Dict[str, Any]
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def to_dict(self) -> Dict[str, Any]:
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return {"type": "Experiment", **asdict(self)}
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@dataclass
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class Run:
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id: str
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experiment_id: str
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parameters: Dict[str, Any]
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metrics: Dict[str, Any]
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environment_hash: str
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def to_dict(self) -> Dict[str, Any]:
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return {"type": "Run", **asdict(self)}
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@dataclass
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class Dataset:
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id: str
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name: str
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version: str
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metadata: Dict[str, Any]
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def to_dict(self) -> Dict[str, Any]:
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return {"type": "Dataset", **asdict(self)}
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@dataclass
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class Model:
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id: str
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architecture: str
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fingerprint: str
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metadata: Dict[str, Any]
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def to_dict(self) -> Dict[str, Any]:
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return {"type": "Model", **asdict(self)}
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@dataclass
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class Environment:
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id: str
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language: str
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version: str
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dependencies: Dict[str, str] # package -> version
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container_hash: Optional[str] = None
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def to_dict(self) -> Dict[str, Any]:
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return {"type": "Environment", **asdict(self)}
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@dataclass
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class EvaluationMetric:
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name: str
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value: float
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unit: str
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def to_dict(self) -> Dict[str, Any]:
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return {"type": "EvaluationMetric", **asdict(self)}
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@dataclass
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class Policy:
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id: str
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rules: Dict[str, Any]
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metadata: Dict[str, Any]
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def to_dict(self) -> Dict[str, Any]:
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return {"type": "Policy", **asdict(self)}
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import time
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import hmac
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import hashlib
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from dataclasses import dataclass
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from typing import Dict, Any
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@dataclass
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class DID:
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did: str
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key: str # simple shared-secret for HMAC-style signing (for MVP)
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def sign(self, message: str) -> str:
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return hmac.new(self.key.encode("utf-8"), message.encode("utf-8"), hashlib.sha256).hexdigest()
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def verify(self, message: str, signature: str) -> bool:
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expected = self.sign(message)
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return hmac.compare_digest(expected, signature)
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@dataclass
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class GovernanceLogEntry:
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action: str
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did: str
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details: Dict[str, Any]
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signature: str
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timestamp: float
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def to_dict(self) -> Dict[str, Any]:
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return {
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"action": self.action,
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"did": self.did,
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"details": self.details,
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"signature": self.signature,
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"timestamp": self.timestamp,
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}
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import json
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import time
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import hashlib
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from typing import List, Dict, Any, Optional
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class ContractRecord(dict):
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"""A lightweight wrapper for contract payloads stored in the ledger."""
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def __init__(self, contract_type: str, payload: Dict[str, Any]):
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super().__init__(payload)
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self["type"] = contract_type
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def to_json(self) -> str:
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return json.dumps(self, sort_keys=True)
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class Block:
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def __init__(self, index: int, previous_hash: str, data: List[ContractRecord], timestamp: Optional[float] = None):
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self.index = index
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self.timestamp = timestamp if timestamp is not None else time.time()
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self.previous_hash = previous_hash
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self.data = data
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self.hash = self.compute_hash()
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def compute_hash(self) -> str:
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payload = {
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"index": self.index,
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"timestamp": self.timestamp,
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"previous_hash": self.previous_hash,
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"data": [d for d in self.data],
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}
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serialized = json.dumps(payload, sort_keys=True, default=str)
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return hashlib.sha256(serialized.encode("utf-8")).hexdigest()
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def to_dict(self) -> Dict[str, Any]:
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return {
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"index": self.index,
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"timestamp": self.timestamp,
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"previous_hash": self.previous_hash,
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"hash": self.hash,
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"data": [d for d in self.data],
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}
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class Ledger:
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def __init__(self):
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self.blocks: List[Block] = [] # append-only
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self._init_genesis()
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def _init_genesis(self):
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genesis = Block(index=0, previous_hash="0" * 64, data=[])
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self.blocks.append(genesis)
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@property
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def head(self) -> Block:
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return self.blocks[-1]
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def head_hash(self) -> str:
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return self.head.hash
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def add_record(self, contract_type: str, payload: Dict[str, Any]) -> Block:
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record = ContractRecord(contract_type, payload)
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prev_hash = "0" * 64 if self.head.index == 0 else self.head.hash
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new_block = Block(
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index=self.head.index + 1,
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previous_hash=prev_hash,
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data=[record],
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)
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self.blocks.append(new_block)
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return new_block
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def to_json(self) -> str:
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return json.dumps([b.to_dict() for b in self.blocks], sort_keys=True, default=str)
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def delta_sync(our_ledger: Ledger, remote_head_hash: str) -> List[Dict[str, Any]]:
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# Return blocks that the remote hasn't seen yet, given the remote head hash.
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# If remote_head_hash is unknown, return entire chain except genesis for safety.
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blocks = []
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start_index = 1 # skip genesis for delta
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if remote_head_hash:
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# locate the block with this hash
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idx = None
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for i, b in enumerate(our_ledger.blocks):
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if b.hash == remote_head_hash:
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idx = i
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break
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if idx is None:
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start_index = 1
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else:
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start_index = idx + 1
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for b in our_ledger.blocks[start_index:]:
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blocks.append(b.to_dict())
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return blocks
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from typing import Dict, Any
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class ContractRegistry:
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def __init__(self) -> None:
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self._contracts: Dict[str, Dict[str, Any]] = {}
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def register_contract(self, name: str, schema: Dict[str, Any], version: str = "1.0.0") -> None:
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self._contracts[name] = {"schema": schema, "version": version}
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def get_contract(self, name: str) -> Dict[str, Any] | None:
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return self._contracts.get(name)
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def all_contracts(self) -> Dict[str, Any]:
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return self._contracts
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import hashlib
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from typing import Dict
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def environment_hash(dependencies: Dict[str, str]) -> str:
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# Deterministic fingerprint of an environment manifest (e.g., pip/conda deps)
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items = sorted(dependencies.items())
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payload = {"deps": items}
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serialized = str(payload).encode("utf-8")
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return hashlib.sha256(serialized).hexdigest()
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[build-system]
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requires = ["setuptools", "wheel"]
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build-backend = "setuptools.build_meta"
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[project]
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name = "mltrail_verifiable_provenance_ledger_for"
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version = "0.1.0"
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description = "A minimal, verifiable provenance ledger for federated ML experiments (MVP)."
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authors = [ { name = "OpenCode AI" } ]
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license = { text = "MIT" }
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requires-python = ">=3.9"
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readme = "README.md"
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dependencies = ["typing_extensions"]
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from setuptools import setup, find_packages
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setup(
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name="mltrail_verifiable_provenance_ledger_for",
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version="0.1.0",
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packages=find_packages(),
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)
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#!/usr/bin/env bash
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set -euo pipefail
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echo "Running Python tests with pytest..."
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# Ensure the repository root is on PYTHONPATH so tests can import the package
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export PYTHONPATH="${PYTHONPATH:+$PYTHONPATH:}$(pwd)"
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pytest -q
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echo "Building Python package..."
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python3 -m build
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echo "ALL TESTS PASSED"
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import pytest
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from mltrail_verifiable_provenance_ledger_for.ledger import Ledger, delta_sync
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from mltrail_verifiable_provenance_ledger_for.contracts import Experiment, Run, Dataset, Model, Environment, EvaluationMetric, Policy
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def test_ledger_append_and_chain():
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ledger = Ledger()
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e = Experiment(id="exp1", name="Demo", version=1, description="test", metadata={"owner": "alice"})
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ledger.add_record("Experiment", e.to_dict())
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head1 = ledger.head
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assert head1.index == 1
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assert head1.previous_hash == "0" * 64
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assert len(head1.data) == 1
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# Add a Run in a new block
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r = Run(id="run1", experiment_id="exp1", parameters={"lr": 0.01}, metrics={"acc": 0.9}, environment_hash="abc123")
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ledger.add_record("Run", r.to_dict())
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head2 = ledger.head
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assert head2.index == 2
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assert head2.previous_hash == head1.hash
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assert len(head2.data) == 1
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def test_delta_sync_basic():
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a = Ledger()
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b = Ledger()
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# A has two blocks now
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a.add_record("Experiment", Experiment(id="exp1", name="Demo", version=1, description="test", metadata={}).to_dict())
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a.add_record("Run", Run(id="run1", experiment_id="exp1", parameters={}, metrics={}, environment_hash="e1").to_dict())
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# B only has genesis and first block (simulate partition)
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b.add_record("Experiment", Experiment(id="exp1", name="Demo", version=1, description="test", metadata={}).to_dict())
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delta = delta_sync(a, b.head_hash())
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assert isinstance(delta, list)
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assert len(delta) == 1 or len(delta) == 2 # depending on whether b's head matches a's first block
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def test_environment_hash_reproducibility():
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from mltrail_verifiable_provenance_ledger_for.util import environment_hash
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deps1 = {"numpy": "1.26.0", "pandas": "2.0.0"}
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deps2 = {"pandas": "2.0.0", "numpy": "1.26.0"}
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assert environment_hash(deps1) == environment_hash(deps2)
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